PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv5_120270_qmkm.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 301aa    MW: 32258.6 Da    PI: 6.5185
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv5_120270_qmkm.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.8e-10150194554
                         HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                         h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  Bv5_120270_qmkm.t1 150 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 194
                         99***********************55......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.53E-15143204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.12145194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-15147204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-7150194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.5E-11151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0031347Biological Processregulation of defense response
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MANNPETPNQ DFLEQLLEMQ TYAAAAAAAA AGDPNLAGTD MNMGPGAPMM LQLSSGPGGF  60
HGPPVFPLGL SLDQAGKPTS GFMKPDEGSS SVNKRFRDDP HHHLVDAAAN SGPKNVYHGQ  120
PMSNPVPVAP HQPAIRPRVR ARRGQATDPH SIAERLRRER IAERIRALQE LVPSVNKTDR  180
AAMLDEIVDY VKFLRLQVKV LSMSRLGGAG AVVPLVTDMP ISSVEEEGGE GGRGQPVWEK  240
WSNDGTERQV AKLMEENVGA AMQFLQSKAL CIMPVSLASA IYHTQPPDAS SLVKPESNPP  300
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154159RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010679161.10.0PREDICTED: transcription factor UNE12
SwissprotO227681e-121UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A0J8F3F10.0A0A0J8F3F1_BETVU; Uncharacterized protein
STRINGGLYMA19G34360.11e-135(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-99bHLH family protein